STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU47801.1COG1024 Enoyl-CoA hydratase/carnithine racemase. (261 aa)    
Predicted Functional Partners:
AFU47793.1
hydroxymethylglutaryl-CoA lyase; COG0119 Isopropylmalate/homocitrate/citramalate synthases.
 0.987
AFU47803.1
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
 
 0.986
AFU45352.1
Pyruvate carboxyltransferase; COG0119 Isopropylmalate/homocitrate/citramalate synthases; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 0.984
AFU47799.1
COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
 0.984
AFU44226.1
hydroxymethylglutaryl-CoA lyase; COG0119 Isopropylmalate/homocitrate/citramalate synthases.
 0.953
AFU46724.1
hydroxymethylglutaryl-CoA lyase; COG0119 Isopropylmalate/homocitrate/citramalate synthases; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 0.951
AFU47802.1
Dinb family protein; COG2318 Uncharacterized protein conserved in bacteria.
       0.800
AFU47800.1
Putative transmembrane protein.
       0.781
AFU47804.1
AMP-binding domain protein; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
 0.766
AFU43979.1
acyl-CoA dehydrogenase-like protein; COG1960 Acyl-CoA dehydrogenases.
  
 0.705
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.