Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFU47828.1Phenylacetic acid degradation-like protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. (153 aa)    
Predicted Functional Partners:
AFU47829.1
COG0789 Predicted transcriptional regulators.
       0.687
AFU47827.1
COG1960 Acyl-CoA dehydrogenases.
  
  
 0.670
AFU44262.1
Putative phenylacetate-CoA ligase; COG1541 Coenzyme F390 synthetase.
 
  
 0.647
AFU44268.1
AMP-dependent synthetase and ligase; COG1022 Long-chain acyl-CoA synthetases (AMP-forming).
 
     0.613
AFU47826.1
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
       0.564
AFU44264.1
Hypothetical protein; COG0301 Thiamine biosynthesis ATP pyrophosphatase.
  
     0.536
AFU44263.1
ABC transporter-like protein; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
     0.513
AFU44265.1
Inner-membrane translocator; COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
     0.511
AFU44267.1
Sulfate-transporting ATPase; COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
  
     0.502
AFU47830.1
Beta-lactamase; COG0491 Zn-dependent hydrolases, including glyoxylases.
  
    0.481
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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