Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFU48241.1COG3181 Uncharacterized protein conserved in bacteria. (326 aa)    
Predicted Functional Partners:
AFU45015.1
COG3333 Uncharacterized protein conserved in bacteria.
 
  
 0.841
AFU45778.1
COG3333 Uncharacterized protein conserved in bacteria.
 
  
 0.841
AFU46979.1
COG3333 Uncharacterized protein conserved in bacteria.
 
  
 0.835
AFU48242.1
ABC transporter-like protein; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
       0.773
AFU48243.1
ABC transporter-like protein; COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
       0.773
AFU48244.1
Inner-membrane translocator; COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.773
AFU48245.1
Inner-membrane translocator; COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
       0.773
AFU45356.1
COG3181 Uncharacterized protein conserved in bacteria.
  
     0.679
AFU48240.1
COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.
       0.613
AFU45014.1
Hypothetical protein.
 
  
 0.514
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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