STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_0027Spore cortex biosynthesis protein. (204 aa)    
Predicted Functional Partners:
yabP
FIG007421: forespore shell protein.
 
  
 0.971
SpoIIE
Hypothetical protein; Stage II sporulation serine phosphatase for sigma-F activation (SpoIIE).
 
     0.815
B4167_0022
FIG124152: hypothetical protein.
 
     0.814
B4167_0026
Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage.
  
    0.774
SpoIIIAF
Stage III sporulation protein AF.
  
    0.774
B4167_1050
FIG01225396: hypothetical protein.
  
     0.772
B4167_0305
FIG01234419: hypothetical protein.
  
     0.767
B4167_0069
Hypothetical protein; Inhibitor of pro-sigmaK processing BofA.
  
   
 0.764
B4167_1015
Membrane protein, putative.
  
     0.763
yfkD
FIG01226204: hypothetical protein.
  
     0.762
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.