STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_0035Hypothetical protein; Fin: required for the switch from sigmaF to sigmaG during sporulation. (76 aa)    
Predicted Functional Partners:
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.837
B4167_1276
Hypothetical protein; Prespore specific transcriptional activator RsfA.
  
     0.745
B4167_0082
Hypothetical protein.
  
     0.741
B4167_1041
Conserved protein YqhG.
  
     0.741
B4167_0181
FIG01231642: hypothetical protein.
  
     0.734
B4167_0027
Spore cortex biosynthesis protein.
 
    0.731
B4167_1534
Hypothetical protein; Prespore specific transcriptional activator RsfA.
  
     0.730
B4167_0814
Hypothetical protein; Germination (Cortex hydrolysis) and sporulation protein GerM.
  
     0.724
B4167_1015
Membrane protein, putative.
  
     0.720
B4167_1008
Hypothetical protein.
  
     0.718
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.