STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_0200Hypothetical protein; Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1); Belongs to the binding-protein-dependent transport system permease family. (319 aa)    
Predicted Functional Partners:
B4167_0198
Hypothetical protein; Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1).
 
 
 0.999
B4167_0199
Hypothetical protein; High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1); Belongs to the binding-protein-dependent transport system permease family.
 
0.999
LivG
Hypothetical protein; Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1).
 
 0.999
B4167_0202
Hypothetical protein; Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1).
 
 0.999
B4167_1157
Hypothetical protein; High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1); Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.956
secF
Hypothetical protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
   
    0.588
B4167_2478
Hypothetical protein; Allergen V5/Tpx-1 related.
   
   0.585
B4167_2670
FIG01108071: hypothetical protein.
   
   0.585
B4167_3315
Hypothetical protein.
   
   0.585
B4167_3497
Hypothetical protein.
   
   0.585
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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