STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_0714GAF domain protein; CDS_ID OB2202. (161 aa)    
Predicted Functional Partners:
B4167_3297
5,10-methylenetetrahydrofolate reductase / -like protein of homocysteine-binding domain; Belongs to the methylenetetrahydrofolate reductase family.
    
  0.904
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
  0.900
B4167_1358
Hypothetical protein; Methionine synthase II (cobalamin-independent).
     
  0.900
B4167_1716
Hypothetical protein; Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase.
     
  0.900
B4167_2494
Methionine gamma-lyase.
     
 0.900
MetH
5-methyltetrahydrofolate--homocysteine methyltransferase.
     
  0.900
B4167_0715
Hypothetical protein; Transcriptional regulator, TetR family.
       0.560
B4167_0713
Hypothetical protein.
       0.519
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.431
MsrB
Peptide methionine sulfoxide reductase MsrB.
     
 0.431
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.