STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MreCHypothetical protein; Involved in formation and maintenance of cell shape. (285 aa)    
Predicted Functional Partners:
MreD
Rod shape-determining protein MreD.
  
 
 0.990
mreB
Rod shape-determining protein MreB.
 
 
 0.986
B4167_2769
MreB-like protein (Mbl protein).
 
 
 0.965
minC
Hypothetical protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
  
  
 0.925
B4167_1016
Cell division protein FtsI [Peptidoglycan synthetase] / Transpeptidase, Penicillin binding protein transpeptidase domain.
 
 
 0.894
minD
Septum site-determining protein MinD.
  
    0.877
B4167_0865
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.845
B4167_3452
Hypothetical protein; Transcriptional regulator in cluster with unspecified monosaccharide ABC transport system.
 
 
 
 0.809
B4167_1542
Penicillin-binding protein 2B.
 
 
 0.794
B4167_2727
Cell division protein FtsW; Belongs to the SEDS family.
 
  
 0.771
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.