STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_1125PTS system, mannose-specific IIA component. (140 aa)    
Predicted Functional Partners:
B4167_1122
PTS system, mannose-specific IID component.
 
 
 0.973
B4167_1123
Hypothetical protein; PTS system, mannose-specific enzyme II, C component.
 
 
 0.973
B4167_1124
PTS system, mannose-specific IIB component.
 
  
 0.968
B4167_1083
PTS system, mannose-specific IID component.
 
 
 0.933
B4167_1472
PTS system, mannose-specific IID component.
 
 
 0.933
B4167_1471
PTS system, mannose-specific IIC component.
 
 
 0.932
B4167_1084
PTS system, mannose-specific IIC component.
 
 
 0.931
B4167_1470
PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component.
 
  
 0.918
B4167_1126
Hypothetical protein; NtrC family Transcriptional regulator, ATPase domain.
 
  
 0.827
B4167_1469
Hypothetical protein; PTS system, IIA component.
  
     0.771
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.