STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_1167General stress protein. (138 aa)    
Predicted Functional Partners:
B4167_1168
General stress protein.
 
  
 0.967
B4167_1166
General stress protein.
  
    0.949
B4167_0934
Hypothetical protein perhaps functionally coupled to transcription elongation factor GreA.
  
     0.623
sigA
Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
    0.592
B4167_3127
Putative lipoprotein SAV1865.
  
     0.559
B4167_1018
Hypothetical protein.
  
     0.541
B4167_1178
Metallo-beta-lactamase family protein.
  
     0.508
B4167_0819
Hypothetical protein; YsoA.
 
    0.507
B4167_3385
Hypothetical protein.
  
     0.496
B4167_0435
FIG01227614: hypothetical protein.
  
     0.486
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.