STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_1288Hypothetical protein; Fe-S oxidoreductase. (704 aa)    
Predicted Functional Partners:
B4167_3473
Respiratory nitrate reductase alpha chain.
  
 
 0.948
NarH
Respiratory nitrate reductase beta chain.
  
 
 0.920
B4167_1779
Hypothetical protein; Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF.
  
 
 0.852
NarJ
Respiratory nitrate reductase delta chain.
  
  
 0.819
etfB
Electron transfer flavoprotein, beta subunit.
 
  
 0.816
B4167_0224
Enoyl-CoA hydratase [isoleucine degradation] / 3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.811
lutC
Hypothetical protein; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source.
  
 
 0.770
B4167_0802
Electron transfer flavoprotein, alpha subunit.
 
  
 0.745
moaA
Hypothetical protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
  
 0.637
B4167_0600
Hypothetical protein; Menaquinone-cytochrome C oxidoreductase, cytochrome C subunit.
 
  
 0.598
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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