STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_1330Hypothetical protein; Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1); Belongs to the ABC transporter superfamily. (322 aa)    
Predicted Functional Partners:
B4167_1333
Hypothetical protein; Dipeptide transport system permease protein DppC (TC 3.A.1.5.2).
 
 0.971
B4167_1825
Hypothetical protein; Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1).
 
 0.959
B4167_1332
Hypothetical protein; Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1).
 
 
 0.954
B4167_1334
Hypothetical protein; Dipeptide transport system permease protein DppB (TC 3.A.1.5.2).
  
 0.944
B4167_1702
Hypothetical protein; Dipeptide transport system permease protein DppC (TC 3.A.1.5.2).
 
 0.931
B4167_1331
Hypothetical protein; Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1); Belongs to the ABC transporter superfamily.
 
   
0.908
B4167_1955
Hypothetical protein; Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1).
 
 0.879
B4167_1703
Hypothetical protein; Dipeptide transport system permease protein DppB (TC 3.A.1.5.2).
  
 0.847
B4167_1956
Hypothetical protein; Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1).
  
 0.838
B4167_1826
Hypothetical protein; Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1).
  
 0.831
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.