STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_1440Hypothetical protein; Lysophospholipase L1 related esterase. (470 aa)    
Predicted Functional Partners:
B4167_2599
Hypothetical protein; YfaA.
 
  
 0.792
B4167_2603
Hypothetical protein; Belongs to the UPF0346 family.
 
  
 0.614
B4167_0840
Hypothetical protein.
  
 
 0.578
B4167_0842
Hypothetical protein.
  
 
 0.578
B4167_1439
Cell wall-binding protein.
       0.458
B4167_0582
Hypothetical protein.
  
    0.454
B4167_2268
Hypothetical protein; Osmosensitive K+ channel histidine kinase KdpD.
  
     0.439
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
  
    0.438
B4167_0196
Hypothetical DUF1027 domain protein.
  
    0.419
B4167_3038
Hypothetical protein.
  
    0.418
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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