STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_1622Hypothetical protein; DNA-binding transcriptional regulator. (348 aa)    
Predicted Functional Partners:
B4167_1621
Hypothetical protein; COG2152 predicted glycoside hydrolase.
 
     0.783
B4167_1788
Glutamate synthase [NADPH] large chain.
    
 
 0.783
B4167_1620
N-acylglucosamine 2-epimerase.
 
     0.723
B4167_1619
Hypothetical protein.
 
    0.550
B4167_1623
Hypothetical protein.
       0.529
Pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.517
B4167_1113
Hypothetical protein; Phosphotransferase system, phosphocarrier protein HPr.
   
 
 0.505
B4167_2431
Phosphocarrier protein of PTS system.
   
 
 0.505
B4167_2106
Hypothetical protein; COG2152 predicted glycoside hydrolase.
 
     0.494
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
   0.431
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.