STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_1791Hypothetical protein. (82 aa)    
Predicted Functional Partners:
B4167_1792
Hypothetical protein.
       0.773
B4167_1182
Hypothetical protein.
  
     0.772
B4167_1003
Hypothetical protein.
  
     0.768
B4167_2435
FIG01226255: hypothetical protein.
  
     0.758
B4167_0620
Hypothetical protein.
  
     0.756
B4167_0942
Hypothetical protein.
  
     0.754
yfkD
FIG01226204: hypothetical protein.
  
     0.753
YutH
Spore coat protein S.
  
     0.750
B4167_0671
Hypothetical protein.
  
     0.749
B4167_2308
Protein GerPC, required for proper assembly of spore coat, mutations lead to super-dormant spore.
  
     0.743
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.