STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_2000Hypothetical protein; Osmosensitive K+ channel histidine kinase KdpD. (456 aa)    
Predicted Functional Partners:
B4167_2001
Hypothetical protein; Two-component response regulator.
 
 0.978
yycF
Hypothetical protein; Two-component response regulator SA14-24.
 
 0.874
phoP
Hypothetical protein; Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
 
 0.871
resD
Hypothetical protein; DNA-binding response regulator ResD.
 
 0.864
B4167_1304
Hypothetical protein; Two-component response regulator.
 
 
 0.859
B4167_2380
Hypothetical protein; Two-component response regulator.
 
 0.858
yclJ
Hypothetical protein; DNA-binding response regulator.
 
 0.852
B4167_0504
Hypothetical protein; Two-component response regulator.
 
 0.851
B4167_2373
Hypothetical protein; Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
 0.823
B4167_0936
Hypothetical protein; Two-component response regulator YvcP.
 
 
 0.790
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.