STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_2010Hypothetical protein. (113 aa)    
Predicted Functional Partners:
B4167_3567
FIG007303: uncharacterized protein.
  
    0.779
B4167_2007
Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase / /.
  
  
 0.706
B4167_2008
Hypothetical protein.
  
  
 0.700
B4167_1734
Hypothetical protein; Benzyl alcohol dehydrogenase.
  
  
 0.651
B4167_0568
Copper-ion-binding protein.
 
  
 0.582
B4167_2011
Hypothetical protein.
       0.526
B4167_2009
Hypothetical protein; Negative transcriptional regulator-copper transport operon.
       0.469
B4167_2541
Hypothetical protein; Copper chaperone.
  
  
 0.462
B4167_2004
Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase / /.
 
  
 0.417
B4167_3392
Hypothetical protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
    
   0.412
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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