STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_2026Hypothetical protein; Transporter, LysE family. (67 aa)    
Predicted Functional Partners:
B4167_2025
Hypothetical protein; Transporter, LysE family.
     0.984
B4167_2027
Transcriptional regulator, GntR family domain / Aspartate aminotransferase.
 
     0.706
B4167_2028
Transcriptional regulator, GntR family domain / Aspartate aminotransferase.
 
     0.652
B4167_2024
Hypothetical protein; Transcriptional regulator, MerR family.
       0.440
B4167_0254
Hypothetical protein; Permease of the drug/metabolite transporter (DMT) superfamily.
  
     0.413
B4167_2176
Hypothetical protein.
  
     0.400
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.