STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_2270Hypothetical protein; Phage integrase. (106 aa)    
Predicted Functional Partners:
B4167_2269
Hypothetical protein; Integrase.
     0.993
B4167_2271
Hypothetical protein.
       0.570
B4167_3801
Stage V sporulation protein B.
  
     0.478
B4167_1655
Late competence protein.
   
    0.461
B4167_3040
Hypothetical protein.
  
     0.459
purR
Hypothetical protein; PurR: transcription regulator associated with purine metabolism.
  
    0.456
hslV
Hypothetical protein; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
  
    0.452
B4167_2554
Hypothetical protein.
  
     0.431
B4167_3685
Prephenate dehydrogenase.
  
    0.428
B4167_3486
DNA topoisomerase III.
 
  
 0.427
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.