STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_2511Hypothetical protein; Putative NADPH-quinone reductase (modulator of drug activity B) / Flavodoxin 2. (241 aa)    
Predicted Functional Partners:
B4167_2512
Hypothetical protein.
 
     0.885
NspC
Hypothetical protein; Carboxynorspermidine decarboxylase, putative.
    
  0.654
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.654
B4167_3588
Hypothetical protein; Na+/H+ antiporter.
  
 
 0.649
B4167_0581
Aspartate aminotransferase.
   
    0.543
B4167_1241
Aspartate aminotransferase.
   
    0.543
B4167_1691
Aspartate aminotransferase.
   
    0.543
B4167_1716
Hypothetical protein; Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase.
   
    0.543
patA
Hypothetical protein; N-acetyl-L,L-diaminopimelate aminotransferase.
   
    0.543
B4167_2510
Hypothetical protein.
       0.539
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.