STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_2802Carbon starvation protein A. (604 aa)    
Predicted Functional Partners:
B4167_1594
COG2879, Hypothetical small protein yjiX.
 
  
 0.834
B4167_2803
Hypothetical protein; Autolysis response regulater LytR.
 
   
 0.602
B4167_2804
Hypothetical protein; Autolysis histidine kinase LytS.
 
   
 0.551
B4167_2872
Hypothetical protein; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.485
B4167_2941
Hypothetical protein; Sodium-solute symporter, putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.485
B4167_2986
Hypothetical protein; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.485
B4167_2588
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
    0.479
B4167_2985
Proline dehydrogenase (Proline oxidase).
   
    0.451
B4167_1438
Hypothetical protein; Serine transporter.
  
    0.426
B4167_0499
Hypothetical protein; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, YtcI -like protein.
   
    0.416
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.