STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_3116Hypothetical protein; Transcription regulator CDS_ID OB0894. (106 aa)    
Predicted Functional Partners:
B4167_2464
FIG01108239: hypothetical protein.
  
     0.773
B4167_2776
Hypothetical protein.
  
     0.769
B4167_0195
BH3430 unknown conserved protein.
  
     0.762
B4167_0603
FIG013069: hypothetical protein co-occurring with TPR domain protein.
  
     0.758
B4167_2461
FIG01225318: hypothetical protein.
  
     0.747
B4167_3774
Hypothetical protein.
  
     0.746
B4167_0995
Hypothetical protein; Membrane-attached cytochrome c550.
  
     0.744
B4167_2305
Hypothetical protein; YisL.
  
     0.737
B4167_0433
Hypothetical protein.
  
     0.735
B4167_0479
Hypothetical protein; Alternate gene name: yoxJ.
  
     0.729
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.