STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_3205ABC transporter ATP-binding protein. (255 aa)    
Predicted Functional Partners:
B4167_3204
ABC transporter permease protein.
 
 0.995
B4167_3206
Hypothetical protein; Two-component system histidine kinase.
 
 
 0.967
B4167_3135
Hypothetical protein.
 
 0.957
B4167_2059
Hypothetical protein; Macrolide export ATP-binding/permease protein MacB.
 
 0.953
B4167_2912
Hypothetical protein; Sensor histidine kinase.
 
 
 0.903
B4167_2915
ABC transporter, permease protein.
 
 
 0.863
B4167_3207
Hypothetical protein; Two component transcriptional regulator, winged helix family.
 
   
 0.838
B4167_0937
ABC transporter permease protein YvcS.
 
 
 0.836
bceR
Hypothetical protein; DNA-binding response regulator.
 
   
 0.595
B4167_3137
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.587
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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