STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_3262Hypothetical protein. (248 aa)    
Predicted Functional Partners:
B4167_3263
Hypothetical protein; Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly.
 
  
 0.985
B4167_3265
Flp pilus assembly protein TadB.
 
  
 0.968
B4167_3266
Type II secretion system protein.
 
  
 0.968
B4167_3264
Hypothetical protein; Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.
 
  
 0.912
B4167_3268
D-amino acid dehydrogenase large subunit.
 
     0.854
B4167_3274
Hypothetical protein.
  
  
 0.814
B4167_3276
D-amino acid dehydrogenase large subunit.
 
     0.811
B4167_1890
Hypothetical protein; Acetyltransferase, GNAT family.
  
     0.692
B4167_1898
Hypothetical protein.
  
     0.550
B4167_0288
Hypothetical protein; Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
  
    0.543
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.