STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_3408Hypothetical protein; RNA polymerase sigma-D factor. (102 aa)    
Predicted Functional Partners:
B4167_3409
Hypothetical protein.
 
     0.822
B4167_3405
Chemotaxis protein CheC -- inhibitor of MCP methylation.
 
     0.769
cheD
Hypothetical protein; Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the cheA kinase.
 
     0.728
B4167_1174
Hypothetical protein.
  
     0.714
B4167_3394
Flagellar biosynthesis protein FliZ.
 
     0.709
B4167_3407
Hypothetical protein; RNA polymerase sigma factor for flagellar operon; Belongs to the sigma-70 factor family.
       0.689
B4167_3404
Positive regulator of CheA protein activity (CheW).
       0.683
B4167_0627
Hypothetical protein.
 
     0.671
B4167_1185
Hypothetical protein.
  
     0.664
B4167_3366
Hypothetical protein.
 
     0.664
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.