STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_3764FIG01226417: hypothetical protein; Belongs to the UPF0403 family. (145 aa)    
Predicted Functional Partners:
B4167_0633
Thioredoxin reductase.
  
  
 0.803
bshC
Hypothetical protein; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.
  
   
 0.792
BshA
Hypothetical protein; Glycosyl transferase, group 1 family protein.
  
   
 0.789
B4167_1166
General stress protein.
  
  
 0.759
B4167_3765
Putative periplasmic protein kinase ArgK and related GTPases of G3E family.
       0.745
B4167_3766
Methylmalonyl-CoA mutase.
       0.745
B4167_3767
Methylmalonyl-CoA mutase.
       0.745
B4167_2073
Hypothetical protein; Thioredoxin.
 
    0.551
yojG
FIG013761: LmbE family protein.
  
  
 0.523
ywhD
Hypothetical fig|282458.1.peg.581 -like protein.
  
     0.522
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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