STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_3827Hypothetical protein. (275 aa)    
Predicted Functional Partners:
B4167_1057
Hypothetical protein.
 
     0.698
B4167_3638
Hypothetical protein; Glycosyl transferase, group 1.
  
     0.567
B4167_3865
Hypothetical protein; Transposase, IS4.
  
     0.499
B4167_3823
Type I restriction-modification system, restriction subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.474
B4167_3824
Type I restriction-modification system, specificity subunit S.
       0.474
B4167_3825
Type I restriction-modification system, DNA-methyltransferase subunit M.
       0.474
B4167_3826
Hypothetical protein.
       0.473
B4167_2789
Mobile element protein.
  
     0.462
B4167_3822
Type I restriction-modification system, restriction subunit R.
       0.452
B4167_0235
FIG00673898: hypothetical protein.
 
     0.421
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.