STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4167_3852Lipopolysaccharide biosynthesis protein WzxC. (485 aa)    
Predicted Functional Partners:
B4167_3849
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.977
B4167_3848
dTDP-glucose 4,6-dehydratase.
  
  
 0.974
Glf
UDP-galactopyranose mutase.
  
  
 0.953
B4167_3850
Hypothetical protein; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase.
 
  
 0.917
B4167_3847
UDP-glucose dehydrogenase.
  
  
 0.863
B4167_3845
UDP-glucose dehydrogenase.
  
  
 0.840
B4167_3858
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.794
B4167_1643
TPR/glycosyl transferase domain protein.
  
  
 0.768
B4167_3853
Hypothetical protein; 4-alpha-L-fucosyltransferase.
  
    0.756
B4167_3851
Hypothetical protein; Transferase hexapeptide repeat containing protein.
 
  
 0.723
Your Current Organism:
Bacillus thermoamylovorans
NCBI taxonomy Id: 35841
Other names: B. thermoamylovorans, Bacillus sp. LMG 18084, Bacillus sp. R-6546, Bacillus sp. R-7440, Bacillus sp. R-7764, LMG 18084, LMG:18084, Lactobacter thermoamylovorans, strain DKP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.