node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dnaD | dnaN | BBR47_25170 | BBR47_00020 | DNA replication protein DnaD. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.515 |
dnaD | rpoE | BBR47_25170 | BBR47_54930 | DNA replication protein DnaD. | DNA-directed RNA polymerase delta chain; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.631 |
dnaD | yabA | BBR47_25170 | BBR47_00800 | DNA replication protein DnaD. | Putative initiation-control protein YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.691 |
dnaD | ydcK | BBR47_25170 | BBR47_05100 | DNA replication protein DnaD. | Conserved hypothetical protein; Belongs to the SprT family. | 0.467 |
dnaN | dnaD | BBR47_00020 | BBR47_25170 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA replication protein DnaD. | 0.515 |
dnaN | holB | BBR47_00020 | BBR47_00780 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III delta' subunit. | 0.977 |
dnaN | yabA | BBR47_00020 | BBR47_00800 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Putative initiation-control protein YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.786 |
holB | dnaN | BBR47_00780 | BBR47_00020 | DNA polymerase III delta' subunit. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.977 |
holB | yaaQ | BBR47_00780 | BBR47_00760 | DNA polymerase III delta' subunit. | Conserved hypothetical protein. | 0.800 |
holB | yaaR | BBR47_00780 | BBR47_00770 | DNA polymerase III delta' subunit. | Conserved hypothetical protein. | 0.868 |
holB | yaaT | BBR47_00780 | BBR47_00790 | DNA polymerase III delta' subunit. | Stage 0 sporulation protein YaaT. | 0.903 |
holB | yabA | BBR47_00780 | BBR47_00800 | DNA polymerase III delta' subunit. | Putative initiation-control protein YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.876 |
holB | yabB | BBR47_00780 | BBR47_00810 | DNA polymerase III delta' subunit. | Conserved hypothetical protein. | 0.795 |
holB | yabC | BBR47_00780 | BBR47_00830 | DNA polymerase III delta' subunit. | Conserved hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.738 |
holB | ydcK | BBR47_00780 | BBR47_05100 | DNA polymerase III delta' subunit. | Conserved hypothetical protein; Belongs to the SprT family. | 0.401 |
rpoE | dnaD | BBR47_54930 | BBR47_25170 | DNA-directed RNA polymerase delta chain; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | DNA replication protein DnaD. | 0.631 |
rpoE | yabA | BBR47_54930 | BBR47_00800 | DNA-directed RNA polymerase delta chain; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | Putative initiation-control protein YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.686 |
rpoE | ydcK | BBR47_54930 | BBR47_05100 | DNA-directed RNA polymerase delta chain; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | Conserved hypothetical protein; Belongs to the SprT family. | 0.538 |
yaaQ | holB | BBR47_00760 | BBR47_00780 | Conserved hypothetical protein. | DNA polymerase III delta' subunit. | 0.800 |
yaaQ | yaaR | BBR47_00760 | BBR47_00770 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.858 |