STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppDDipeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (341 aa)    
Predicted Functional Partners:
dppC
Dipeptide ABC transporter permease protein.
 
  0.990
dppB
Dipeptide ABC transporter permease protein.
 
  0.983
dppE
Dipeptide ABC transporter substrate binding protein.
  
 
  0.916
BAH42738.1
Oligopeptide ABC transporter substrate binding protein precursor.
 
 
  0.853
BAH42742.1
Oligopeptide ABC transporter permease protein.
    0.807
BAH43652.1
Oligopeptide ABC transporter permease protein.
    0.806
BAH43365.1
Oligopeptide ABC transporter permease protein.
    0.802
tomC
Oligopeptide ABC transporter permease protein.
    0.777
BAH45603.1
ABC transporter permease protein.
    0.689
BAH43651.1
Oligopeptide ABC transporter permease protein.
 
   0.670
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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