STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbdBCytochrome bd-I oxidase subunit II. (343 aa)    
Predicted Functional Partners:
cbdA
Cytochrome d oxidase subunit I.
 
 
 0.992
cydA
Cytochrome d ubiquinol oxidase subunit I.
  
 
 0.926
cydB
Cytochrome d ubiquinol oxidase subunit II.
    
  0.900
cydC
ABC transporter ATP binding/permease protein.
  
  
 0.846
cydD
ABC transporter ATP binding/permease protein.
  
  
 0.810
BAH44759.1
Conserved hypothetical protein.
  
     0.633
BAH42126.1
Probable transcriptional regulator.
  
     0.623
yneJ
Conserved hypothetical membrane protein.
  
     0.582
BAH41424.1
Probable transcriptional regulator.
  
     0.566
yraF
Putative spore coat protein F.
  
     0.556
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.