STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAH41441.1Probable oligopeptide ABC transporter substrate binding protein precursor. (548 aa)    
Predicted Functional Partners:
BAH43364.1
Oligopeptide ABC transporter permease protein.
    0.822
dppB
Dipeptide ABC transporter permease protein.
    0.812
BAH42741.1
Oligopeptide ABC transporter permease protein.
    0.809
BAH43651.1
Oligopeptide ABC transporter permease protein.
    0.806
tomB
Oligopeptide ABC transporter permease protein.
    0.805
dppC
Dipeptide ABC transporter permease protein.
 
    0.776
BAH43365.1
Oligopeptide ABC transporter permease protein.
 
    0.770
BAH42742.1
Oligopeptide ABC transporter permease protein.
 
    0.752
BAH43652.1
Oligopeptide ABC transporter permease protein.
 
    0.749
tomC
Oligopeptide ABC transporter permease protein.
 
    0.743
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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