STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAH41562.1Putative transcriptional regulator. (315 aa)    
Predicted Functional Partners:
BAH41561.1
Conserved hypothetical protein.
 
     0.841
BAH41563.1
Probable D,D-peptidase/D,D-carboxypeptidase.
       0.526
BAH41566.1
Probable amino acid racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.495
ddl-3
Ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.484
BAH41565.1
Probable D,D-peptidase/D,D-carboxypeptidase.
       0.484
BAH42404.1
Conserved hypothetical protein.
  
     0.447
BAH41567.1
Probable two-component sensor histidine kinase.
       0.408
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.