STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yraEConserved hypothetical protein. (64 aa)    
Predicted Functional Partners:
yraD
Putative spore coat protein F.
 
  
 0.981
yraF
Putative spore coat protein F.
 
  
 0.970
adhB
Probable NAD alcohol dehydrogenase.
 
    0.869
yraG
Conserved hypothetical protein.
 
  
0.858
BAH42189.1
Conserved hypothetical protein.
 
  
 0.674
BAH45524.1
Small acid-soluble spore protein.
  
     0.627
cbdB
Cytochrome bd-I oxidase subunit II.
  
     0.517
BAH42299.1
Hypothetical protein.
  
     0.503
BAH41775.1
Hypothetical protein.
       0.470
BAH46033.1
Conserved hypothetical membrane protein.
  
     0.433
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.