Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
abgA | abgB | BBR47_08250 | BBR47_08260 | Probable aminobenzoyl-glutamate utilization protein A. | Probable aminobenzoyl-glutamate utilization protein B. | 0.696 |
abgA | abgT | BBR47_08250 | BBR47_22490 | Probable aminobenzoyl-glutamate utilization protein A. | Probable aminobenzoyl-glutamate transport protein. | 0.429 |
abgA | hemH-2 | BBR47_08250 | BBR47_08270 | Probable aminobenzoyl-glutamate utilization protein A. | Putative ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.440 |
abgB | abgA | BBR47_08260 | BBR47_08250 | Probable aminobenzoyl-glutamate utilization protein B. | Probable aminobenzoyl-glutamate utilization protein A. | 0.696 |
abgB | abgT | BBR47_08260 | BBR47_22490 | Probable aminobenzoyl-glutamate utilization protein B. | Probable aminobenzoyl-glutamate transport protein. | 0.447 |
abgB | hemH-2 | BBR47_08260 | BBR47_08270 | Probable aminobenzoyl-glutamate utilization protein B. | Putative ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.537 |
abgT | abgA | BBR47_22490 | BBR47_08250 | Probable aminobenzoyl-glutamate transport protein. | Probable aminobenzoyl-glutamate utilization protein A. | 0.429 |
abgT | abgB | BBR47_22490 | BBR47_08260 | Probable aminobenzoyl-glutamate transport protein. | Probable aminobenzoyl-glutamate utilization protein B. | 0.447 |
hemH-2 | abgA | BBR47_08270 | BBR47_08250 | Putative ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | Probable aminobenzoyl-glutamate utilization protein A. | 0.440 |
hemH-2 | abgB | BBR47_08270 | BBR47_08260 | Putative ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | Probable aminobenzoyl-glutamate utilization protein B. | 0.537 |