Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAH42053.1 | BAH43272.1 | BBR47_10760 | BBR47_22950 | Hypothetical protein. | Conserved hypothetical protein. | 0.755 |
BAH42053.1 | BAH44838.1 | BBR47_10760 | BBR47_38610 | Hypothetical protein. | Conserved hypothetical protein. | 0.744 |
BAH42053.1 | cotE | BBR47_10760 | BBR47_33780 | Hypothetical protein. | Probable spore coat protein E. | 0.738 |
BAH42053.1 | gerD | BBR47_10760 | BBR47_02580 | Hypothetical protein. | Spore germination protein precursor. | 0.755 |
BAH42053.1 | ogt | BBR47_10760 | BBR47_10750 | Hypothetical protein. | Probable methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.789 |
BAH42053.1 | rnhA | BBR47_10760 | BBR47_10730 | Hypothetical protein. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.696 |
BAH42053.1 | yaaC | BBR47_10760 | BBR47_00130 | Hypothetical protein. | Conserved hypothetical protein. | 0.718 |
BAH42053.1 | yabK | BBR47_10760 | BBR47_01020 | Hypothetical protein. | Conserved hypothetical protein. | 0.737 |
BAH42053.1 | ydcC | BBR47_10760 | BBR47_04940 | Hypothetical protein. | Conserved hypothetical protein. | 0.731 |
BAH42053.1 | ygaP | BBR47_10760 | BBR47_10740 | Hypothetical protein. | Conserved hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. | 0.736 |
BAH43272.1 | BAH42053.1 | BBR47_22950 | BBR47_10760 | Conserved hypothetical protein. | Hypothetical protein. | 0.755 |
BAH43272.1 | BAH44838.1 | BBR47_22950 | BBR47_38610 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
BAH43272.1 | cotE | BBR47_22950 | BBR47_33780 | Conserved hypothetical protein. | Probable spore coat protein E. | 0.769 |
BAH43272.1 | gerD | BBR47_22950 | BBR47_02580 | Conserved hypothetical protein. | Spore germination protein precursor. | 0.772 |
BAH43272.1 | yaaC | BBR47_22950 | BBR47_00130 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.749 |
BAH43272.1 | yabK | BBR47_22950 | BBR47_01020 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.770 |
BAH43272.1 | ydcC | BBR47_22950 | BBR47_04940 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
BAH44838.1 | BAH42053.1 | BBR47_38610 | BBR47_10760 | Conserved hypothetical protein. | Hypothetical protein. | 0.744 |
BAH44838.1 | BAH43272.1 | BBR47_38610 | BBR47_22950 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
BAH44838.1 | cotE | BBR47_38610 | BBR47_33780 | Conserved hypothetical protein. | Probable spore coat protein E. | 0.774 |
page 1 of 4