Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAH42480.1 | BAH44912.1 | BBR47_15030 | BBR47_39350 | Putative oxidoreductase. | Probable adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase. | 0.676 |
BAH42480.1 | cbiB | BBR47_15030 | BBR47_12440 | Putative oxidoreductase. | Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.444 |
BAH42480.1 | cbiC | BBR47_15030 | BBR47_12480 | Putative oxidoreductase. | Putative cobalt-precorrin-8X methylmutase. | 0.543 |
BAH42480.1 | cbiL | BBR47_15030 | BBR47_12510 | Putative oxidoreductase. | Cobalt-precorrin-2 C(20)-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.577 |
BAH42480.1 | cbiP | BBR47_15030 | BBR47_12550 | Putative oxidoreductase. | Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.518 |
BAH42480.1 | cobB | BBR47_15030 | BBR47_12540 | Putative oxidoreductase. | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.855 |
BAH42480.1 | cobS | BBR47_15030 | BBR47_12420 | Putative oxidoreductase. | Cobalamin (5'-phosphate) synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.466 |
BAH42480.1 | cobT | BBR47_15030 | BBR47_12560 | Putative oxidoreductase. | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.989 |
BAH42480.1 | cobU | BBR47_15030 | BBR47_12410 | Putative oxidoreductase. | Bifunctional adenosylcobalamin biosynthesis protein. | 0.629 |
BAH44912.1 | BAH42480.1 | BBR47_39350 | BBR47_15030 | Probable adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase. | Putative oxidoreductase. | 0.676 |
BAH44912.1 | cbiB | BBR47_39350 | BBR47_12440 | Probable adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase. | Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.990 |
BAH44912.1 | cbiC | BBR47_39350 | BBR47_12480 | Probable adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase. | Putative cobalt-precorrin-8X methylmutase. | 0.724 |
BAH44912.1 | cbiL | BBR47_39350 | BBR47_12510 | Probable adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase. | Cobalt-precorrin-2 C(20)-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.640 |
BAH44912.1 | cbiP | BBR47_39350 | BBR47_12550 | Probable adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase. | Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.981 |
BAH44912.1 | cobB | BBR47_39350 | BBR47_12540 | Probable adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase. | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.917 |
BAH44912.1 | cobC | BBR47_39350 | BBR47_12430 | Probable adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase. | Alpha-ribazole phosphatase. | 0.712 |
BAH44912.1 | cobS | BBR47_39350 | BBR47_12420 | Probable adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase. | Cobalamin (5'-phosphate) synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.987 |
BAH44912.1 | cobT | BBR47_39350 | BBR47_12560 | Probable adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase. | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.983 |
BAH44912.1 | cobU | BBR47_39350 | BBR47_12410 | Probable adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase. | Bifunctional adenosylcobalamin biosynthesis protein. | 0.913 |
cbiB | BAH42480.1 | BBR47_12440 | BBR47_15030 | Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | Putative oxidoreductase. | 0.444 |
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