STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAH42419.1Conserved hypothetical membrane protein. (378 aa)    
Predicted Functional Partners:
BAH42416.1
Conserved hypothetical protein.
 
     0.823
BAH42418.1
Two-component sensor histidine kinase.
 
     0.674
BAH42417.1
Two-component response regulator.
     
 0.637
BAH42415.1
Probable ABC transporter permease protein.
 
     0.615
BAH42420.1
Hypothetical protein.
       0.548
BAH42414.1
Probable ABC transporter ATP binding protein.
 
     0.505
BAH42421.1
Hypothetical protein.
       0.408
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.