Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAH42736.1 | BAH42737.1 | BBR47_17590 | BBR47_17600 | Hypothetical protein. | Conserved hypothetical protein. | 0.447 |
BAH42736.1 | gmd | BBR47_17590 | BBR47_17580 | Hypothetical protein. | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.773 |
BAH42736.1 | pgcA | BBR47_17590 | BBR47_17570 | Hypothetical protein. | Phosphoglucomutase. | 0.476 |
BAH42737.1 | BAH42736.1 | BBR47_17600 | BBR47_17590 | Conserved hypothetical protein. | Hypothetical protein. | 0.447 |
BAH42737.1 | gmd | BBR47_17600 | BBR47_17580 | Conserved hypothetical protein. | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.447 |
gmd | BAH42736.1 | BBR47_17580 | BBR47_17590 | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | Hypothetical protein. | 0.773 |
gmd | BAH42737.1 | BBR47_17580 | BBR47_17600 | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | Conserved hypothetical protein. | 0.447 |
gmd | pgcA | BBR47_17580 | BBR47_17570 | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | Phosphoglucomutase. | 0.544 |
pgcA | BAH42736.1 | BBR47_17570 | BBR47_17590 | Phosphoglucomutase. | Hypothetical protein. | 0.476 |
pgcA | gmd | BBR47_17570 | BBR47_17580 | Phosphoglucomutase. | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.544 |