Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAH42362.1 | BAH42589.1 | BBR47_13850 | BBR47_16120 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.912 |
BAH42362.1 | BAH44007.1 | BBR47_13850 | BBR47_30300 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.914 |
BAH42362.1 | BAH45200.1 | BBR47_13850 | BBR47_42230 | Conserved hypothetical protein. | Hypothetical membrane protein. | 0.900 |
BAH42362.1 | BAH45345.1 | BBR47_13850 | BBR47_43680 | Conserved hypothetical protein. | GTP pyrophosphokinase. | 0.915 |
BAH42362.1 | ndk | BBR47_13850 | BBR47_24680 | Conserved hypothetical protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.918 |
BAH42362.1 | nrdF | BBR47_13850 | BBR47_31340 | Conserved hypothetical protein. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.912 |
BAH42362.1 | pyk | BBR47_13850 | BBR47_13840 | Conserved hypothetical protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.914 |
BAH42362.1 | relA | BBR47_13850 | BBR47_18820 | Conserved hypothetical protein. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.902 |
BAH42589.1 | BAH42362.1 | BBR47_16120 | BBR47_13850 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.912 |
BAH42589.1 | gmk | BBR47_16120 | BBR47_37340 | Conserved hypothetical protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.910 |
BAH42589.1 | ndk | BBR47_16120 | BBR47_24680 | Conserved hypothetical protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.914 |
BAH42589.1 | nrdE | BBR47_16120 | BBR47_31350 | Conserved hypothetical protein. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.990 |
BAH42589.1 | nrdF | BBR47_16120 | BBR47_31340 | Conserved hypothetical protein. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.900 |
BAH42589.1 | pyk | BBR47_16120 | BBR47_13840 | Conserved hypothetical protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.936 |
BAH42589.1 | relA | BBR47_16120 | BBR47_18820 | Conserved hypothetical protein. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.900 |
BAH44007.1 | BAH42362.1 | BBR47_30300 | BBR47_13850 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.914 |
BAH44007.1 | BAH45200.1 | BBR47_30300 | BBR47_42230 | Conserved hypothetical protein. | Hypothetical membrane protein. | 0.902 |
BAH44007.1 | BAH45345.1 | BBR47_30300 | BBR47_43680 | Conserved hypothetical protein. | GTP pyrophosphokinase. | 0.908 |
BAH44007.1 | ndk | BBR47_30300 | BBR47_24680 | Conserved hypothetical protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.900 |
BAH44007.1 | pyk | BBR47_30300 | BBR47_13840 | Conserved hypothetical protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.900 |
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