STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAH43149.1Putative formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (680 aa)    
Predicted Functional Partners:
BAH45696.1
Putative electron transfer protein.
 
 
 0.959
gltA
Glutamate synthase large chain.
  
 
 0.817
ctaC
Cytochrome c oxidase polypeptide II precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.813
qcrC
Menaquinol-cytochrome c reductase cytochrome b/c subunit.
  
 
 0.747
qcrA
Menaquinol-cytochrome c reductase iron-sulfur subunit.
  
 
 0.727
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.710
moaDE
Probable molybdopterin converting factor MoaDE.
 
   
 0.686
cccB
Probable cytochrome c551 precursor.
  
 
 0.666
BAH46203.1
Hypothetical protein.
  
 
 0.666
BAH46281.1
Conserved hypothetical protein.
  
 
 0.666
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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