STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAH43258.1Hypothetical protein. (631 aa)    
Predicted Functional Partners:
ylbF
Regulatory protein YlbF; Belongs to the UPF0342 family.
 
     0.817
BAH42806.1
Hypothetical protein.
  
     0.774
BAH43059.1
Hypothetical protein.
  
     0.773
BAH43482.1
Hypothetical protein.
  
     0.772
BAH41089.1
Hypothetical protein.
  
     0.771
BAH43470.1
Hypothetical protein.
  
     0.771
BAH44877.1
Hypothetical protein.
  
     0.771
BAH41552.1
Hypothetical protein.
  
     0.770
BAH46377.1
Truncated late competence protein ComFA.
  
     0.768
BAH41664.1
Hypothetical protein.
  
     0.767
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.