Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAH43754.1Conserved hypothetical protein. (212 aa)    
Predicted Functional Partners:
BAH43753.1
Hypothetical protein.
 
     0.959
BAH43755.1
Putative aminotransferase.
 
     0.771
BAH43692.1
Hypothetical protein.
  
     0.713
BAH43694.1
Hypothetical protein.
  
     0.711
BAH43693.1
Conserved hypothetical protein.
  
     0.672
BAH43691.1
Conserved hypothetical protein.
  
     0.658
BAH45519.1
Conserved hypothetical protein.
  
     0.618
BAH41738.1
Hypothetical protein.
  
     0.584
BAH43713.1
Hypothetical protein.
 
 
   0.584
BAH45448.1
Hypothetical protein.
  
     0.580
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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