Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAH44656.1 | BAH44719.1 | BBR47_36790 | BBR47_37420 | Conserved hypothetical membrane protein. | Conserved hypothetical membrane protein. | 0.409 |
BAH44717.1 | BAH44718.1 | BBR47_37400 | BBR47_37410 | Conserved hypothetical protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | 0.775 |
BAH44717.1 | BAH44719.1 | BBR47_37400 | BBR47_37420 | Conserved hypothetical protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Conserved hypothetical membrane protein. | 0.467 |
BAH44718.1 | BAH44717.1 | BBR47_37410 | BBR47_37400 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | Conserved hypothetical protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.775 |
BAH44718.1 | BAH44719.1 | BBR47_37410 | BBR47_37420 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | Conserved hypothetical membrane protein. | 0.493 |
BAH44719.1 | BAH44656.1 | BBR47_37420 | BBR47_36790 | Conserved hypothetical membrane protein. | Conserved hypothetical membrane protein. | 0.409 |
BAH44719.1 | BAH44717.1 | BBR47_37420 | BBR47_37400 | Conserved hypothetical membrane protein. | Conserved hypothetical protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.467 |
BAH44719.1 | BAH44718.1 | BBR47_37420 | BBR47_37410 | Conserved hypothetical membrane protein. | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | 0.493 |
BAH44719.1 | BAH45061.1 | BBR47_37420 | BBR47_40840 | Conserved hypothetical membrane protein. | Hypothetical protein. | 0.436 |
BAH44719.1 | BAH45820.1 | BBR47_37420 | BBR47_48430 | Conserved hypothetical membrane protein. | Conserved hypothetical membrane protein. | 0.445 |
BAH44719.1 | pyrD | BBR47_37420 | BBR47_49350 | Conserved hypothetical membrane protein. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.499 |
BAH44719.1 | pyrF | BBR47_37420 | BBR47_37700 | Conserved hypothetical membrane protein. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.499 |
BAH45061.1 | BAH44719.1 | BBR47_40840 | BBR47_37420 | Hypothetical protein. | Conserved hypothetical membrane protein. | 0.436 |
BAH45820.1 | BAH44719.1 | BBR47_48430 | BBR47_37420 | Conserved hypothetical membrane protein. | Conserved hypothetical membrane protein. | 0.445 |
pyrD | BAH44719.1 | BBR47_49350 | BBR47_37420 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Conserved hypothetical membrane protein. | 0.499 |
pyrD | pyrF | BBR47_49350 | BBR47_37700 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.963 |
pyrF | BAH44719.1 | BBR47_37700 | BBR47_37420 | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | Conserved hypothetical membrane protein. | 0.499 |
pyrF | pyrD | BBR47_37700 | BBR47_49350 | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.963 |