Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAH44234.1 | BAH44961.1 | BBR47_32570 | BBR47_39840 | Putative non-ribosomal peptide synthetase. | Putative non-ribosomal synthetase. | 0.998 |
BAH44234.1 | BAH44962.1 | BBR47_32570 | BBR47_39850 | Putative non-ribosomal peptide synthetase. | Putative polyketide synthase. | 0.997 |
BAH44234.1 | BAH44964.1 | BBR47_32570 | BBR47_39870 | Putative non-ribosomal peptide synthetase. | Putative mixed polyketide synthase/non-ribosomal peptide synthetase. | 0.998 |
BAH44234.1 | BAH44969.1 | BBR47_32570 | BBR47_39920 | Putative non-ribosomal peptide synthetase. | Conserved hypothetical protein. | 0.999 |
BAH44234.1 | lgrA | BBR47_32570 | BBR47_28920 | Putative non-ribosomal peptide synthetase. | Linear pentadecapeptide gramicidin synthetase LgrA. | 0.998 |
BAH44234.1 | lgrB | BBR47_32570 | BBR47_28930 | Putative non-ribosomal peptide synthetase. | Putative linear pentadecapeptide gramicidin synthetase LgrB. | 0.998 |
BAH44234.1 | lgrC-2 | BBR47_32570 | BBR47_29490 | Putative non-ribosomal peptide synthetase. | Truncated linear pentadecapeptide gramicidin synthetase LgrC. | 0.998 |
BAH44234.1 | lgrD | BBR47_32570 | BBR47_29500 | Putative non-ribosomal peptide synthetase. | Linear pentadecapeptide gramicidin synthetase LgrD. | 0.998 |
BAH44234.1 | tycB | BBR47_32570 | BBR47_27880 | Putative non-ribosomal peptide synthetase. | Tyrocidine synthetase II. | 0.998 |
BAH44234.1 | tycC | BBR47_32570 | BBR47_27890 | Putative non-ribosomal peptide synthetase. | Tyrocidine synthetase III. | 0.998 |
BAH44961.1 | BAH44234.1 | BBR47_39840 | BBR47_32570 | Putative non-ribosomal synthetase. | Putative non-ribosomal peptide synthetase. | 0.998 |
BAH44961.1 | BAH44962.1 | BBR47_39840 | BBR47_39850 | Putative non-ribosomal synthetase. | Putative polyketide synthase. | 0.985 |
BAH44961.1 | BAH44964.1 | BBR47_39840 | BBR47_39870 | Putative non-ribosomal synthetase. | Putative mixed polyketide synthase/non-ribosomal peptide synthetase. | 0.986 |
BAH44961.1 | BAH44969.1 | BBR47_39840 | BBR47_39920 | Putative non-ribosomal synthetase. | Conserved hypothetical protein. | 0.823 |
BAH44961.1 | lgrA | BBR47_39840 | BBR47_28920 | Putative non-ribosomal synthetase. | Linear pentadecapeptide gramicidin synthetase LgrA. | 0.866 |
BAH44961.1 | lgrB | BBR47_39840 | BBR47_28930 | Putative non-ribosomal synthetase. | Putative linear pentadecapeptide gramicidin synthetase LgrB. | 0.458 |
BAH44961.1 | lgrC-2 | BBR47_39840 | BBR47_29490 | Putative non-ribosomal synthetase. | Truncated linear pentadecapeptide gramicidin synthetase LgrC. | 0.468 |
BAH44961.1 | lgrD | BBR47_39840 | BBR47_29500 | Putative non-ribosomal synthetase. | Linear pentadecapeptide gramicidin synthetase LgrD. | 0.842 |
BAH44961.1 | tycB | BBR47_39840 | BBR47_27880 | Putative non-ribosomal synthetase. | Tyrocidine synthetase II. | 0.517 |
BAH44961.1 | tycC | BBR47_39840 | BBR47_27890 | Putative non-ribosomal synthetase. | Tyrocidine synthetase III. | 0.944 |
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