Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAH45008.1 | BAH45009.1 | BBR47_40310 | BBR47_40320 | Hypothetical protein. | Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.780 |
BAH45008.1 | BAH45010.1 | BBR47_40310 | BBR47_40330 | Hypothetical protein. | Hypothetical protein. | 0.588 |
BAH45009.1 | BAH45008.1 | BBR47_40320 | BBR47_40310 | Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Hypothetical protein. | 0.780 |
BAH45009.1 | BAH45010.1 | BBR47_40320 | BBR47_40330 | Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Hypothetical protein. | 0.591 |
BAH45009.1 | bioD | BBR47_40320 | BBR47_54630 | Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.436 |
BAH45009.1 | cinA | BBR47_40320 | BBR47_33980 | Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | CinA-like protein; Belongs to the CinA family. | 0.539 |
BAH45009.1 | rtcB | BBR47_40320 | BBR47_39290 | Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Conserved hypothetical protein; Belongs to the RtcB family. | 0.411 |
BAH45009.1 | rtcB-2 | BBR47_40320 | BBR47_58350 | Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Conserved hypothetical protein; Belongs to the RtcB family. | 0.436 |
BAH45009.1 | yjcH | BBR47_40320 | BBR47_40100 | Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Conserved hypothetical protein. | 0.449 |
BAH45010.1 | BAH45008.1 | BBR47_40330 | BBR47_40310 | Hypothetical protein. | Hypothetical protein. | 0.588 |
BAH45010.1 | BAH45009.1 | BBR47_40330 | BBR47_40320 | Hypothetical protein. | Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.591 |
bioD | BAH45009.1 | BBR47_54630 | BBR47_40320 | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.436 |
cinA | BAH45009.1 | BBR47_33980 | BBR47_40320 | CinA-like protein; Belongs to the CinA family. | Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.539 |
rtcB | BAH45009.1 | BBR47_39290 | BBR47_40320 | Conserved hypothetical protein; Belongs to the RtcB family. | Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.411 |
rtcB-2 | BAH45009.1 | BBR47_58350 | BBR47_40320 | Conserved hypothetical protein; Belongs to the RtcB family. | Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.436 |
yjcH | BAH45009.1 | BBR47_40100 | BBR47_40320 | Conserved hypothetical protein. | Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.449 |