Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAH45082.1 | BAH45084.1 | BBR47_41050 | BBR47_41070 | Conserved hypothetical membrane protein. | Small acid-soluble spore protein. | 0.442 |
BAH45082.1 | spoIVA | BBR47_41050 | BBR47_24570 | Conserved hypothetical membrane protein. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.507 |
BAH45082.1 | spoVAC-2 | BBR47_41050 | BBR47_41040 | Conserved hypothetical membrane protein. | Stage V sporulation protein AC. | 0.920 |
BAH45082.1 | spoVAD | BBR47_41050 | BBR47_24000 | Conserved hypothetical membrane protein. | Stage V sporulation protein AD. | 0.594 |
BAH45082.1 | spoVAD-2 | BBR47_41050 | BBR47_41030 | Conserved hypothetical membrane protein. | Stage V sporulation protein AD. | 0.925 |
BAH45082.1 | spoVAE-3 | BBR47_41050 | BBR47_41020 | Conserved hypothetical membrane protein. | Putative stage V sporulation protein AE. | 0.920 |
BAH45082.1 | spoVAF | BBR47_41050 | BBR47_24030 | Conserved hypothetical membrane protein. | Stage V sporulation protein AF. | 0.408 |
BAH45084.1 | BAH45082.1 | BBR47_41070 | BBR47_41050 | Small acid-soluble spore protein. | Conserved hypothetical membrane protein. | 0.442 |
BAH45084.1 | gpr | BBR47_41070 | BBR47_20040 | Small acid-soluble spore protein. | Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.780 |
BAH45084.1 | spoIIAB | BBR47_41070 | BBR47_23950 | Small acid-soluble spore protein. | anti-sigma-F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.588 |
BAH45084.1 | spoIVA | BBR47_41070 | BBR47_24570 | Small acid-soluble spore protein. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.707 |
BAH45084.1 | spoVAC-2 | BBR47_41070 | BBR47_41040 | Small acid-soluble spore protein. | Stage V sporulation protein AC. | 0.838 |
BAH45084.1 | spoVAD | BBR47_41070 | BBR47_24000 | Small acid-soluble spore protein. | Stage V sporulation protein AD. | 0.740 |
BAH45084.1 | spoVAD-2 | BBR47_41070 | BBR47_41030 | Small acid-soluble spore protein. | Stage V sporulation protein AD. | 0.816 |
BAH45084.1 | spoVAE-3 | BBR47_41070 | BBR47_41020 | Small acid-soluble spore protein. | Putative stage V sporulation protein AE. | 0.821 |
BAH45084.1 | spoVAF | BBR47_41070 | BBR47_24030 | Small acid-soluble spore protein. | Stage V sporulation protein AF. | 0.746 |
BAH45084.1 | spoVT | BBR47_41070 | BBR47_01050 | Small acid-soluble spore protein. | Stage V sporulation protein T. | 0.655 |
gpr | BAH45084.1 | BBR47_20040 | BBR47_41070 | Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | Small acid-soluble spore protein. | 0.780 |
gpr | spoIIAB | BBR47_20040 | BBR47_23950 | Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | anti-sigma-F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.768 |
gpr | spoIVA | BBR47_20040 | BBR47_24570 | Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.814 |
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