STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yvfEPutative polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family. (390 aa)    
Predicted Functional Partners:
yvfC
Putative polysaccharide biosynthesis protein.
  
 0.986
yveM
Putative polysaccharide biosynthesis protein.
 
  
 0.982
BAH45227.1
Putative polysaccharide biosynthesis protein.
 
  
 0.899
BAH45221.1
Conserved hypothetical protein.
 
     0.894
BAH45224.1
Hypothetical protein.
 
     0.868
ywqC
Probable capsular polysaccharide biosynthesis protein.
 
  
 0.858
BAH45231.1
Putative polysaccharide biosynthesis protein.
  
  
 0.856
ywqD
Tyrosine-protein kinase.
 
  
 0.844
mnaA
Putative UDP-N-acetylglucosamine 2-epimerase.
 
  
 0.805
BAH45226.1
Conserved hypothetical protein.
  
    0.798
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.