STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAH45852.1Conserved hypothetical membrane protein. (163 aa)    
Predicted Functional Partners:
sppA
Putative signal peptide peptidase.
 
  
 0.881
BAH45853.1
Conserved hypothetical protein.
 
    0.692
BAH41085.1
Conserved hypothetical protein.
  
    0.567
BAH45125.1
Hypothetical protein.
 
    0.440
BAH45850.1
Probable ABC transporter ATP-binding protein.
       0.434
BAH44259.1
Hypothetical protein.
  
     0.417
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.