Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAH42126.1 | BAH44474.1 | BBR47_11490 | BBR47_34970 | Probable transcriptional regulator. | Hypothetical protein. | 0.435 |
BAH42126.1 | BAH44881.1 | BBR47_11490 | BBR47_39040 | Probable transcriptional regulator. | Putative transcriptional regulator. | 0.703 |
BAH42126.1 | BAH45052.1 | BBR47_11490 | BBR47_40750 | Probable transcriptional regulator. | Conserved hypothetical membrane protein. | 0.715 |
BAH42126.1 | BAH45249.1 | BBR47_11490 | BBR47_42720 | Probable transcriptional regulator. | Conserved hypothetical protein. | 0.656 |
BAH42126.1 | BAH45333.1 | BBR47_11490 | BBR47_43560 | Probable transcriptional regulator. | Hypothetical protein. | 0.676 |
BAH42126.1 | BAH46062.1 | BBR47_11490 | BBR47_50850 | Probable transcriptional regulator. | Putative holin. | 0.647 |
BAH42126.1 | est | BBR47_11490 | BBR47_55140 | Probable transcriptional regulator. | Probable esterase. | 0.412 |
BAH42126.1 | gerSC | BBR47_11490 | BBR47_48940 | Probable transcriptional regulator. | Spore germination protein. | 0.588 |
BAH44474.1 | BAH42126.1 | BBR47_34970 | BBR47_11490 | Hypothetical protein. | Probable transcriptional regulator. | 0.435 |
BAH44474.1 | BAH45249.1 | BBR47_34970 | BBR47_42720 | Hypothetical protein. | Conserved hypothetical protein. | 0.472 |
BAH44474.1 | BAH45333.1 | BBR47_34970 | BBR47_43560 | Hypothetical protein. | Hypothetical protein. | 0.634 |
BAH44474.1 | BAH45640.1 | BBR47_34970 | BBR47_46630 | Hypothetical protein. | Conserved hypothetical protein. | 0.721 |
BAH44474.1 | BAH46062.1 | BBR47_34970 | BBR47_50850 | Hypothetical protein. | Putative holin. | 0.625 |
BAH44474.1 | est | BBR47_34970 | BBR47_55140 | Hypothetical protein. | Probable esterase. | 0.753 |
BAH44474.1 | gerSC | BBR47_34970 | BBR47_48940 | Hypothetical protein. | Spore germination protein. | 0.521 |
BAH44881.1 | BAH42126.1 | BBR47_39040 | BBR47_11490 | Putative transcriptional regulator. | Probable transcriptional regulator. | 0.703 |
BAH44881.1 | BAH45052.1 | BBR47_39040 | BBR47_40750 | Putative transcriptional regulator. | Conserved hypothetical membrane protein. | 0.477 |
BAH44881.1 | BAH45249.1 | BBR47_39040 | BBR47_42720 | Putative transcriptional regulator. | Conserved hypothetical protein. | 0.420 |
BAH44881.1 | BAH45333.1 | BBR47_39040 | BBR47_43560 | Putative transcriptional regulator. | Hypothetical protein. | 0.544 |
BAH44881.1 | BAH46062.1 | BBR47_39040 | BBR47_50850 | Putative transcriptional regulator. | Putative holin. | 0.535 |
page 1 of 4